The Teachers Service Commission has finally explained why thousands of teachers received lower-than-expected June salaries after noticing a sudden increase in Pay As You Earn (PAYE) deductions. 


In a statement issued on June 24, the Commission attributed the deductions to a payroll system anomaly that had previously granted employees duplicate tax relief on National Social Security Fund (NSSF) contributions. 


The correction, implemented in the June payroll, immediately increased PAYE deductions and triggered widespread complaints from teachers who believed new taxes had been introduced. 


The clarification comes after days of frustration in schools and on social media, where teachers demanded answers over shrinking take-home pay amid rising living costs.

AG TSC CEO
The payroll correction may be lawful, but it has renewed concerns about transparency, communication, and teachers’ shrinking incomes.

TSC says payroll anomaly caused unexpected PAYE deductions

According to the Commission, the issue emerged during the reconfiguration of the Integrated Personnel and Payroll Database (IPPD) system following changes introduced under the Tax Laws (Amendment) Act, 2024.


The legislation exempted contributions made to the Affordable Housing Levy (AHL) Fund and the Social Health Insurance Fund (SHIF) from income tax, requiring payroll systems across government institutions to be updated.


During the update process, the payroll system allegedly applied duplicate tax relief on NSSF contributions, resulting in incorrect PAYE calculations.


TSC says the June payroll corrected the anomaly to align deductions with existing tax regulations.

What TSC says happened

IssueImpact
Payroll system reconfigurationRequired tax updates
Duplicate NSSF tax reliefIncorrect PAYE calculations
June payroll correctionHigher PAYE deductions
Tax law complianceAdjustments implemented

The Commission insists that teachers were not subjected to new taxes but rather a correction of a previous payroll error.

Teachers shocked by reduced June salaries

The correction translated into lower take-home pay for many teachers, triggering immediate backlash.


Several teachers reported noticing unexpected reductions in their salaries and questioned why the Commission had not communicated the changes beforehand.


Many employees initially believed the government had introduced fresh tax measures.


A spot check showed that some teachers experienced an increase of approximately KSh108 in PAYE deductions compared to previous months.

Example of salary impact

ItemPrevious MonthJune 2026
Net SalaryKSh10,442KSh10,334
Difference-KSh108

Although the amount varied depending on salary scale and deductions, the adjustment generated significant concern among affected teachers.

Communication concerns fuel teacher frustration

While TSC maintains that the adjustment was necessary, many teachers have criticized the Commission for failing to notify employees before implementing the correction.


Some argued that payroll changes affecting salaries should be communicated in advance to avoid confusion and speculation.


The issue quickly gained traction on online forums and teacher discussion groups, where educators questioned why payroll corrections often appear to reduce employee earnings.


One teacher participating in an online discussion noted that the lack of communication caused more concern than the actual deduction itself.

Key concerns raised by teachers

ConcernDescription
Lack of communicationNo prior notice issued
Reduced take-home payUnexpected salary cuts
Cost of living pressuresRising household expenses
Payroll transparencyDemand for clearer explanations

The criticism reflects broader frustrations over declining disposable income among public sector workers.

TSC defends move as legal compliance measure

Despite the backlash, TSC has defended the payroll adjustment, saying it was necessary to ensure accurate PAYE computation under existing tax laws.


The Commission maintains that the June deductions merely corrected a previous error and aligned payroll processing with statutory requirements.


Officials argue that failure to correct the anomaly would have resulted in continued inaccuracies in tax calculations.

TSC's position

PositionExplanation
No new taxes introducedExisting tax rules applied
Payroll correction necessaryDuplicate relief removed
Compliance objectiveAccurate PAYE calculations
Future payrollsExpected to remain compliant

The Commission hopes the clarification will address concerns among teachers and staff affected by the adjustment.

Salary controversy highlights growing financial pressures

Even as TSC seeks to calm the uproar, the incident has reignited concerns about teachers' financial well-being.


Many educators continue to face rising costs for food, housing, transport, and healthcare, making even modest deductions highly noticeable.


The controversy also underscores the importance of timely communication whenever payroll changes affect employee earnings.


As teachers digest the explanation, attention is likely to shift toward whether future payroll adjustments will be communicated more transparently to avoid similar disputes and restore confidence in the Commission's payroll management systems.